BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E11LP1|AL429921
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1459 1623 0.0
>3x_Contig1459
Length = 6711
Score = 1623 bits (817), Expect = 0.0
Identities = 836/841 (99%), Gaps = 2/841 (0%)
Strand = Plus / Minus
Query: 1 gagtatagatcccgttctactctattccctatttgagttatcagcattgaaatcgtgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 gagtatagatcccgttctactctattccctatttgagttatcagcattgaaatcgtgtta 2233
Query: 61 ttactaacgattttctttttgctaatgggagtgaagactttgcaaaaccacgagcaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2232 ttactaacgattttctttttgctaatgggagtgaagactttgcaaaaccacgagcaccca 2173
Query: 121 gtaagaattcaaatagttcatgtcatgaaactgcattcttttcatcctagttcgatggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2172 gtaagaattcaaatagttcatgtcatgaaactgcattcttttcatcctagttcgatggta 2113
Query: 181 tcttatggtggtttgtatgtwaaaacaaaacatatagcatccaaatacagtgaaaagcat 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 tcttatggtggtttgtatgtaaaaacaaaacatatagcatccaaatacagtgaaaagcat 2053
Query: 241 gcagtagaaatagagtgcagcattttttttttttttcaatattcaatccattctttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2052 gcagtagaaatagagtgcagcattttttttttttttcaatattcaatccattctttgaaa 1993
Query: 301 aagaattccaacaataacaaacaataaggttgacagtagaaagaacgcgaaggcaactta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1992 aagaattccaacaataacaaacaataaggttgacagtagaaagaacgcgaaggcaactta 1933
Query: 361 aactcattagcattgcatttcttttgagttcctgaaa-gcatgtacaacccaaatattgt 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1932 aactcattagcattgcatttcttttgagttcctgaaaggcatgtacaacccaaatattgt 1873
Query: 420 ctgatttcttagtaagtgaaatcagatatttggtggcaaaaggaacaataagttcccgtc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 ctgatttcttagtaagtgaaatcagatatttggtggcaaaaggaacaataagttcccgtc 1813
Query: 480 tgcaccggtttctatggggaaacgccaattaatgggaccatttttaaaagggaaatgaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1812 tgcaccggtttctatggggaaacgccaattaatgggaccatttttaaaagggaaatgaaa 1753
Query: 540 aaaaaaaatgattgaaaaatgaaaactagcatattgccccagattcgcatgtkgcacgag 599
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1752 aaaaaaaatgattgaaaaatgaaaactagcatattgccccagattcgcatgtagcacgag 1693
Query: 600 aggrtactgagatttgaaaaggtcgcgtttacagcatccacatgcaaaagctgtccacgg 659
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1692 aggatactgagatttgaaaaggtc-cgtttacagcatccacatgcaaaagctgtccacgg 1634
Query: 660 cgatattactggaaattgcaatgccaatgccaatgctactggcgaccggaaacggattat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1633 cgatattactggaaattgcaatgccaatgccaatgctactggcgaccggaaacggattat 1574
Query: 720 gaggagcctagttagtttggcatgaaataaaggtaccaccagatctctacgtaccattgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1573 gaggagcctagttagtttggcatgaaataaaggtaccaccagatctctacgtaccattgt 1514
Query: 780 tgttcttgcgacctttttttttggtctttattattcattaaccagcaaaactgtgtaata 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 tgttcttgcgacctttttttttggtctttattattcattaaccagcaaaactgtgtaata 1454
Query: 840 c 840
|
Sbjct: 1453 c 1453
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,644
Number of Sequences: 1807
Number of extensions: 21644
Number of successful extensions: 423
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)